Formation of the children microbiota: its role in overall metabolism
https://doi.org/10.22625/2072-6732-2022-14-1-20-30
Abstract
Progress in the study of the human microbiome, in terms of its impact on the maintenance of health, is considered as one of the most significant achievements of modern biology and medicine. Studying the bacteria inhabiting the body, understanding the patterns of human interaction with the world of microorganisms, will help to better determine their role in general metabolism, influence on the functioning of various body systems, form a more accurate understanding of the pathogenesis of diseases, become the basis for the prevention of infectious diseases, and the implementation of microbial therapy of infections, obesity, diabetes.
The qualitative and quantitative composition of the microbiome, on which the future human health largely depends, affects the mode of birth and the nature and type of nutrition of the newborn.
About the Authors
L. A. Dzhaparidzе
Saint-Petersburg Scientific Center Russian Academy of Sciences
Russian Federation
Russian Federation
Saint-Petersburg
O. A. Soldatova
Saint-Petersburg Scientific Center Russian Academy of Sciences
Russian Federation
Russian Federation
Saint-Petersburg
References
1. Shaposhnikova LI. Mikrobiota cheloveka kak osnovnoi fiziologicheskii organ. Uspekhi sovremennogo estestvoznaniya. 2006; 9:80-82. (In Russ.)
2. Dzhaparidze LA, Suvorov AN. Study Of Human Microbiota As A Basis For Treatment Of Infectious And Non-Infectious Disorders. Regional ecology. 2018; 4 (54):16-27. (In Russ.) doi:10.30694/1026-5600-2018-4-16-27
3. Belyaeva IA, Bombardirova EP, Mitish MD, et.al. Ontogenesis and Dysontogenesis of the Gut Microbiota in Young Children: a Trigger Mechanism of Child Health Disorders. Current Pediatrics. 2017;16(1):29-38. (In Russ.) doi: 10.15690/vsp.v16i1.1692
4. Aagaard K, Ma J, Antony K, et al. The Placenta Harbors a Unique Microbiome. Sci Transl Med. 2014;6(237):237-237. doi:10.1126/scitranslmed.3008599
5. Mayer E.A., Knight R., Mazmanian S.K., et al. Gut microbes and the brain: paradigm shift in neuroscience. J. Neurosci. 2014;34:15490–15496. doi:10.1523/JNEUROSCI.3299-14.2014
6. Rajilić-Stojanović M, Heilig H, Molenaar D et al. Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults. Environ Microbiol. 2009;11(7):1736-1751. doi:10.1111/j.1462-2920.2009.01900.x
7. Ardissone A, de la Cruz D, Davis-Richardson A et al. Meconium Microbiome Analysis Identifies Bacteria Correlated with Premature Birth. PLoS One. 2014;9(3):e90784. doi:10.1371/journal.pone.0090784
8. Sampson T, Debelius J, Thron T et al. Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease. Cell. 2016;167(6):1469-1480.e12. doi:10.1016/j.cell.2016.11.018
9. Kang D, Adams J, Gregory A et al. Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study. Microbiome. 2017;5(1). doi:10.1186/s40168-016-0225-7
10. Antipov D, Hartwick N, Shen M, et al. plasmidSPAdes: assembling plasmids from whole genome sequencing data. Bioinformatics. 2016:btw493. doi:10.1093/bioinformatics/btw493
11. Ursova NI. Topical and unsolved issues of probiotic therapy. Lechashhij vrach. 2013;8: 60–65. (in Russ)
12. Nikolaeva I, Tsaregorodtsev A, Shaikhieva G. Formation of the intestinal microbiota of children and the factors that influence this process. Rossiyskiy Vestnik Perinatologii i Pediatrii (Russian Bulletin of Perinatology and Pediatrics). 2018;63(3):13-18. doi:10.21508/1027-4065-2018-63-3-13-18
13. Landman C, Qu vrain E. Gut microbiota: Description, role and pathophysiologic implications. Rev Med Interne 2016;37(6):418–423. doi:10.1016/j.revmed.2015.12.012
14. Ravin N.V. Metagenomika: genomni analiz microorganizmov bez ich kultivirovaniya. IX Rossiiski simpozium «Belki i peptidi». Sochi – Dagomys, 2019. Spezvipusk, v.2./ Аcta naturae/ , p.5
15. Dominguez-Bello M, Costello E, Contreras M et al. Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proceedings of the National Academy of Sciences. 2010;107(26):11971-11975. doi:10.1073/pnas.1002601107
16. Satokari R, Gr nroos T, Laitinen K, Salminen S, Isolauri E. Bifidobacterium and Lactobacillus DNA in the human placenta. Lett Appl Microbiol. 2009;48(1):8-12. doi:10.1111/j.1472-765x.2008.02475.x
17. DiGiulio D, Romero R, Amogan H et al. Microbial Prevalence, Diversity and Abundance in Amniotic Fluid During Preterm Labor: A Molecular and Culture-Based Investigation. PLoS One. 2008;3(8):e3056. doi:10.1371/journal.pone.0003056
18. Oh K, Lee S, Jung H, Kim G, Romero R, Yoon B. Detection of ureaplasmas by the polymerase chain reaction in the amniotic fluid of patients with cervical insufficiency. J Perinat Med. 2010;38(3). doi:10.1515/jpm.2010.040
19. Eckburg P. Diversity of the Human Intestinal Microbial Flora. Science. 2005;308(5728):1635-1638. doi:10.1126/science.1110591
20. Moles L, Gómez M, Heilig H et al. Bacterial Diversity in Meconium of Preterm Neonates and Evolution of Their Fecal Microbiota during the First Month of Life. PLoS One. 2013;8(6):e66986. doi:10.1371/journal.pone.0066986
21. Jiménez E, Fernández L, Marín M et al. Isolation of Commensal Bacteria from Umbilical Cord Blood of Healthy Neonates Born by Cesarean Section. Curr Microbiol. 2005;51(4):270-274. doi:10.1007/s00284-005-0020-3
22. Jiménez E, Marín M, Martín R et al. Is meconium from healthy newborns actually sterile?. Res Microbiol. 2008;159(3):187-193. doi:10.1016/j.resmic.2007.12.007
23. Antonova L, Samoukina A, Alekseeva Y, Fedotova T, Petrova O, Strakhova S. Modern view on the formation of microbiotes digestive tract in children of the first year of life. Modern Problems of Science and Education. 2018;(№6 2018). doi:10.17513/spno.28289
24. Marcobal A, Sonnenburg J. Human milk oligosaccharide consumption by intestinal microbiota. Clinical Microbiology and Infection. 2012;18:12-15. doi:10.1111/j.1469-0691.2012.03863.x
25. Underwood M, German J, Lebrilla C, Mills D. Bifidobacterium longum subspecies infantis: champion colonizer of the infant gut. Pediatr Res. 2014;77(1-2):229-235. doi:10.1038/pr.2014.156
26. Mackie R, Sghir A, Gaskins H. Developmental microbial ecology of the neonatal gastrointestinal tract. Am J Clin Nutr. 1999;69(5):1035s-1045s. doi:10.1093/ajcn/69.5.1035s
27. Marchesi J, Adams D, Fava F et al. The gut microbiota and host health: a new clinical frontier. Gut. 2015;65(2):330-339. doi:10.1136/gutjnl-2015-309990
28. Zhang Y, Zhang H. Microbiota associated with type 2 diabetes and its related complications. Food Science and Human Wellness. 2013;2(3-4):167-172. doi:10.1016/j.fshw.2013.09.002
29. Yoshida N, Yamashita T, Hirata K. Gut Microbiome and Cardiovascular Diseases. Diseases. 2018;6(3):56. doi:10.3390/diseases6030056
30. Li Q, Han Y, Dy A, Hagerman R. The Gut Microbiota and Autism Spectrum Disorders. Front Cell Neurosci. 2017;11. doi:10.3389/fncel.2017.00120
31. Shao Y, Forster S, Tsaliki E et al. Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth. Nature. 2019;574(7776):117-121. doi:10.1038/s41586-019-1560-1
32. Hooper L, Littman D, Macpherson A. Interactions Between the Microbiota and the Immune System. Science (1979). 2012;336(6086):1268-1273. doi:10.1126/science.1223490
33. B ckhed F, Roswall J, Peng Y et al. Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life. Cell Host Microbe. 2015;17(5):690-703. doi:10.1016/j.chom.2015.04.004
34. Cong X, Xu W, Romisher R, et al. Gut Microbiome and Infant Health: Brain-Gut-Microbiota Axis and Host Genetic Factors. Yale J Biol Med 2016; 89 (3): 299–308.
35. Nikolaeva I.V., Bondarenko V.M., Fialkina S.V., i dr. Vliyanie mikroflory materi na sostav mikrobiotsenoza kishechnika rebenka v period grudnogo vskarmlivaniya // Zhurn mikrobiologii, ehpidemiologii i immunobiologii. 2008;5:87–92.
36. Yatsunenko T, Rey F, Manary M et al. Human gut microbiome viewed across age and geography. Nature. 2012;486(7402):222-227. doi:10.1038/nature11053
37. Horta B, Loret de Mola C, Victora C. Long-term consequences of breastfeeding on cholesterol, obesity, systolic blood pressure and type 2 diabetes: a systematic review and metaanalysis. Acta Paediatr. 2015;104:30-37. doi:10.1111/apa.13133
38. Dorr H, Sittel I. Bacteriological examination of human milk and its relation to mastitis. Zentralbl. Gynakol. 1953;75:1833–1835.
39. Stuebe A, Seed P, LaTuga M. A Review of the Source and Function of Microbiota in Breast Milk. Semin Reprod Med. 2014;32(01):068-073. doi:10.1055/s-0033-1361824
40. De Leoz M, Kalanetra K, Bokulich N et al. Human Milk Glycomics and Gut Microbial Genomics in Infant Feces Show a Correlation between Human Milk Oligosaccharides and Gut Microbiota: A Proof-of-Concept Study. J Proteome Res. 2014;14(1):491-502. doi:10.1021/pr500759e
41. Charbonneau M, O’Donnell D, Blanton L et al. Sialylated Milk Oligosaccharides Promote Microbiota-Dependent Growth in Models of Infant Undernutrition. Cell. 2016;164(5):859-871. doi:10.1016/j.cell.2016.01.024
42. Lif Holgerson P, Harnevik L, Hernell O, Tanner A, Johansson I. Mode of Birth Delivery Affects Oral Microbiota in Infants. J Dent Res. 2011;90(10):1183-1188. doi:10.1177/0022034511418973
43. Cabrera-Rubio R, Collado M, Laitinen K, Salminen S, Isolauri E, Mira A. The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery. Am J Clin Nutr. 2012;96(3):544-551. doi:10.3945/ajcn.112.037382
44. Hunt K, Foster J, Forney L et al. Characterization of the Diversity and Temporal Stability of Bacterial Communities in Human Milk. PLoS One. 2011;6(6):e21313. doi:10.1371/journal.pone.0021313
45. Khan M, Gerasimidis K, Edwards C, Shaikh M. Role of Gut Microbiota in the Aetiology of Obesity: Proposed Mechanisms and Review of the Literature. J Obes. 2016;2016:1-27. doi:10.1155/2016/7353642
46. FAO/WHO. Evaluation of Health and Nutritional Properties of Probiotics in Food Including Powder Milk with Live Acid Bacteria. Report of a Joint FAO/WHO Expert Consultation; 2001. Córdoba, Argentina.
47. Kadooka Y, Sato M, Imaizumi K et al. Regulation of abdominal adiposity by probiotics (Lactobacillus gasseri SBT2055) in adults with obese tendencies in a randomized controlled trial. Eur J Clin Nutr. 2010;64(6):636-643. doi:10.1038/ejcn.2010.19
48. Luoto R, Kalliomäki M, Laitinen K, Isolauri E. The impact of perinatal probiotic intervention on the development of overweight and obesity: follow-up study from birth to 10 years. Int J Obes. 2010;34(10):1531-1537. doi:10.1038/ijo.2010.50
49. Sun J, Qiao Y, Qi C et al. High-fat-diet–induced obesity is associated with decreased antiinflammatory Lactobacillus reuteri sensitive to oxidative stress in mouse Peyer’s patches. Nutrition. 2016;32(2):265-272. doi:10.1016/j.nut.2015.08.020
50. Ley R, Backhed F, Turnbaugh P, et al. Obesity alters gut microbial ecology. Proceedings of the National Academy of Sciences. 2005;102(31):11070-11075. doi:10.1073/pnas.0504978102
51. Qin J, Li R, Raes J et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature. 2010;464(7285):59-65. doi:10.1038/nature08821
52. Kazakov S.V., Shalyto A.A. Analiz genomnykh i metagenomnykh dannykh v obrazovatel’nykh tselyakh // KIO. 2016;3:5-15.
53. Hu J, Nomura Y, Bashir A et al. Diversified Microbiota of Meconium Is Affected by Maternal Diabetes Status. PLoS One. 2013;8(11):e78257. doi:10.1371/journal.pone.0078257
54. Brugman S, Klatter F, Visser J et al. Antibiotic treatment partially protects against type 1 diabetes in the Bio-Breeding diabetes-prone rat. Is the gut flora involved in the development of type 1 diabetes?. Diabetologia. 2006;49(9):2105-2108. doi:10.1007/s00125-006-0334-0
55. Paun A, Yau C, Danska J. Immune recognition and response to the intestinal microbiome in type 1 diabetes. J Autoimmun. 2016;71:10-18. doi:10.1016/j.jaut.2016.02.004
Review
For citations:
Dzhaparidzе L.A., Soldatova O.A. Formation of the children microbiota: its role in overall metabolism. Journal Infectology. 2022;14(1):20-30. (In Russ.) https://doi.org/10.22625/2072-6732-2022-14-1-20-30
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