Preview

Journal Infectology

Advanced search

For the question about Molecular Epidemiology of Hepatitis B Virus Infection in the Republic Sakha (Yakutia)

Abstract

Objective: To estimate the prevalence of genetic variants and features of the molecular epidemiology of HBV in Yakutia residents suffering from HBV.

Materials and methods: The study involved 35 patients with chronic hepatitis B from urban and rural areas of Yakutia while most of the group were representatives of the autochthonous population. In the present study we used genotyping by direct sequencing of the Pre-S1 / Pre-S2 / S region of HBV DNA.

Results: Based on the phylogenetic analysis of the isolates showed that among patients examined HBV identified only D genotype, which is the most common genotype of HBV in the Russian Federation. It is shown prevalence of HBV subtype D2 (85,8%) compared to the HBV subtype D3 (14,2%).

Conclusion: We identified clearly clustered group of HBV isolates and close ties within the group, which suggests the existence of at least four permanent sources of infection, acting for a few years and decades. The systematic application of complex molecular, virological, epidemiological methods and molecular phylogenetics could contribute to the current understanding of the epidemiology of HBV and improve the quality of the traditional methods of supervision in Russia.

About the Authors

A. V. Semenov
Saint-Petersburg Science Research Institute of Epidemiology and Microbiology named after Pasteur, Saint Petersburg, Russia First Saint-Petersburg State Medical University named after acad. I.P. Pavlov, Saint Petersburg, Russia North-Western State Medical University named after I.I. Mechnikov, Saint Petersburg, Russia
Russian Federation


Yu. V. Ostankova
Saint-Petersburg Science Research Institute of Epidemiology and Microbiology named after Pasteur, Saint Petersburg, Russia
Russian Federation


V. V. Gerasimova
North-Eastern Federal University named after M.K. Ammosov, Yakutsk, Russia
Russian Federation


M. A. Bichurina
Saint-Petersburg Science Research Institute of Epidemiology and Microbiology named after Pasteur, Saint Petersburg, Russia
Russian Federation


S. L. Mukomolov
Saint-Petersburg Science Research Institute of Epidemiology and Microbiology named after Pasteur, Saint Petersburg, Russia First Saint-Petersburg State Medical University named after acad. I.P. Pavlov, Saint Petersburg, Russia
Russian Federation


A. V. Kozlov
North-Western State Medical University named after I.I. Mechnikov, Saint Petersburg, Russia
Russian Federation


A. A. Totolian
Saint-Petersburg Science Research Institute of Epidemiology and Microbiology named after Pasteur, Saint Petersburg, Russia First Saint-Petersburg State Medical University named after acad. I.P. Pavlov, Saint Petersburg, Russia
Russian Federation

Competing Interests: заведующий лабораторией молекулярной иммунологии Санкт-Петербургского научно-исследовательского института эпидемиологии и микробиологии имени Пастера, заведующий кафедрой иммунологии Первого Санкт-Петербургского государственного медицинского университета имени академика И.П. Павлова, д.м.н., профессор, член-корреспондент РАН; тел.: 8(812)232-00-66


References

1. Nechaev, V.V. Hronicheskie virusnye gepatity: proshloe, nastoyashchee, budushchee / V.V. Nechaev, S.L. Mukomolov, V.YU. Nazarov, L.N. Pozhidaeva, V.V. CHahar’yan // Ehpidemiologiya i infekcionnye bolezni. – 2013. – № 3. – C. 4-10. (In Russia)

2. World Health Organization. Hepatitis B factsheet N°204 Updated July 2015. [Internet] Geneva: WHO, 2015. Available from: http://www.who.int/mediacentre/factsheets/fs204/en/

3. Hepatitis B general fact sheet. Centre for Disease Control and Prevention. 2010; Publication №. 21-1073.

4. Yuen, M.F. Hepatitis B virus genotypes: natural history and implications for treatment / M.F. Yuen, C.L. Lai // Expert Rev. Gastroenterol. Hepatol. – 2007. – vol. 1. – P. 321–328.

5. Mukomolov, S.L. Primenenie immunoglobulina protiv gepatita v dlya profilaktiki ehtoj infekcii / S.L. Mukomolov, M.I. Mihajlov // Ehpidemiologiya i infekcionnye bolezni. Aktual’nye voprosy. – 2014. – № 1. – S. 47-54. (In Russia)

6. Elpaeva, E.A. Genotipicheskaya harakteristika virusa gepatita V u hronicheski inficirovannyh bol’nyh / Elpaeva E.A., Poreckova E.A., Pisareva M.A., Kovelenov A.YU., Alikyan I.S., Gal’brajh R.B., Grudinin M.P., Esaulenko E.V. // Dal’nevostochnyj zhurnal infekcionnoj patologii. – 2009. – № 15. – S. 55-58. (In Russia)

7. Khan, A. Epidemiological and clinical evaluation of hepatitis B, hepatitis C, and delta hepatitis viruses in Tajikistan / A. Khan, F. Kurbanov, Y. Tanaka, A. Elkady, M. Sugiyama, A. Dustov, M. Mizokami // J. Med. Virol. – 2008. – vol. 80 (2). – P. 268-276.

8. Kato, H. Hepatitis B virus genotypes in Uzbekistan and validity of two different systems for genotyping / H. Kato, R. Ruzibakiev, N. Yuldasheva, T. Hegay, F. Kurbanov, B. Achundjanov, L. Tuichiev, S. Usuda, R. Ueda, M. Mizokami // J. Med. Virol. – 2002. – vol. 67 (4). – P. 477-483.

9. Elpaeva, E. A. Rol’ mutantnyh form virusa gepatita V v progressiruyushchem techenii hronicheskogo gepatita V / E. A. Elpaeva, M. M. Pisareva, O. E. Nikitina, S. N. Kizhlo, M. P. Grudinin, O. P. Dudanova // Uchenye zapiski Petrozavodskogo Gosudarstvennogo universiteta. Ceriya: estestvennye i tekhnicheskie nauki. – 2014. – t. 6. – C. 41-46. (In Russia)

10. PisarevaPisareva, M. M. Molekulyarno-biologicheskie osobennosti virusa gepatita B dikoj i mutantnoj form v trekh regionah Rossijskoj Federacii: avtoref. dis. … kand. biol. nauk / M. M. Pisareva. – SPb., 2007. – 110 s. (In Russia)

11. Guirgis, B.S.S., Hepatitis B virus genotyping: current methods and clinical implications / B.S.S. Guirgis, R.O. Abbas, H.M.E. Azzazy // Int. J. Infect. Dis. – 2010. – vol. 14. – P. 941-953.

12. Semenov, A.V., Molekulyarno-ehpidemiologicheskie osobennosti izolyatov virusa gepatita S iz raznyh regionov Respubliki Saha (YAkutiya) / Semenov A.V., Ostankova YU.V., Gerasimova V.V., Bichurina M.A., Kozlov A.V., Mukomolov S.L., Totolyan Areg A. // Infekciya i immunitet. – 2015. – T. 5. № 4. – S. 359-372. (In Russia)

13. Brichler, S. African, Amerindian and European hepatitis B virus strains circulate on the Caribbean Island of Martinique / S. Brichler, G. Lagathu, M.A. Chekaraou, F. Le Gal, A. Edouard, P. Dény, R. Césaire, E. Gordien // J. Gen. Virol. – 2013. – vol. 94 (Pt 10). – P. 2318-2329.

14. Higgins, D.G. CLUSTAL V: improved software for multiple sequence alignment / D.G. Higgins, A.J. Bleasby, R. Fuchs // Comput. Appl. Biosci. – 1992. – vol. 8. – P. 189–191.

15. Tamura, K. Nei: MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods / K. Tamura, D. Peterson, N. Peterson, G. Stecher // Mol. Biol. Evol. – 2011. – vol. 28. – P. 2731–2739.

16. Deterding, K. Pevalence of HBV genotypes in Central and Eastern Europe / K. Deterding, I. Constantinescu, F.D. Nedelcu, J. Gervain, V. Nemecek, O. Srtunecky, A. Vince, I. Grgurevic, K.P. Bielawski, M. Zalewska // J. Med. Virol. – 2008. – vol. 80. – P. 1707–1711.

17. Dzierzanowska-Fangrat, K. Hepatitis B virus genotypes in children with chronic hepatitis B in Poland / K. Dzierzanowska- Fangrat, M. Woynarowski, I. Szczygielska, P. Jozwiak, J. Cielecka-Kuszyk, D. Dzierzanowska, K. Madalinski // Eur. J. Gastroenterol. Hepatol. – 2006. – vol. 18. – P. 655–658.

18. Indeeva, L.D. EHpidemiologicheskaya i kliniko-morfologicheskaya harakteristika gepatitov B i C i geterogennost’ ih vozbuditelej v Respublike Saha (YAkutiya): avtoref. dis. ... kand. med. Nauk / L.D. Indeeva. – M., 2010. – 25 s. (In Russia)

19. Kuzin, S.N. Geneticheskoe raznoobrazie virusa gepatita V na territorii Respubliki Saha (YAkutiya) / S.N. Kuzin, N.N. Zabelin, E.I. Samohvalov // EHpidemiologiya i vakcinoprofilaktika. – 2008. – t. 5. – S. 1–5. (In Russia)

20. Morozov, V. M. Molekulyarno-geneticheskaya harakteristika variantov virusa gepatita V, cirkuliruyushchih v Sankt-Peterburge i YAkutii: avtoref. dis. … kand. biol. nauk / V. M. Morozov. – SPb., 2003. – 127 s. (In Russia)

21. Zotova, A.V. Rasprostranennost’ virusnyh gepatitov V i S sredi olenevodov-kochevnikov v Respublike Saha (YAkutiya) / A.V. Zotova, O.E. Popova, K.K. Kyuregyan // Materialy VII Rossijskoj nauchno-prakticheskoj konferencii s mezhdunarodnym uchastiem «Virusnye gepatity – ehpidemiologiya, diagnostika, lechenie i profilaktika». – 2007. – S. 28–29. (In Russia)

22. Manujlov, V.A. Razlichnaya vstrechaemost’ subgenotipov virusa gepatita V i subtipov HBsAg u korennogo naseleniya Sibiri / V.A. Manujlov, E.V. CHub, I.G. Netesova // Materialy VII Rossijskoj nauchno-prakticheskoj konferencii s mezhdunarodnym uchastiem «Virusnye gepatity – ehpidemiologiya, diagnostika, lechenie i profilaktika». – 2007. – C. 45–46. (In Russia)

23. Ramachandran, S. Recent Population Expansions of Hepatitis B Virus in the United States / S. Ramachandran, M.A. Purdy, G. Xia, D.S. Campo, Z.E. Dimitrova, E.H. Teshale, Ch.G. Teo, Y.E. Khudyakov // Virol. – 2014. – vol. 88 (24). – P. 13971–13980.

24. Tallo, T. Hepatitis B virus genotype D strains from Estonia share sequence similarity with strains from Siberia and may specify ayw4 / T. Tallo, H. Norder, V. Tefanova, T. Krispin, L. Priimagi, S. Mukomolov, M. Mikhailov, L. O. Magnius // J. Med. Virol. – 2004. – vol. 74. – P. 221–227.

25. Gerasimova, V.V. Molekulyarnaya ehpidemiologiya virusa gepatita V v YAkutii / V.V. Gerasimova, N.R. Maksimova, I.A. Levakova, S.L. Mukomolov // YAkutskij medicinskij zhurnal. – 2014. – № 3 (47). – S. 54-57. (In Russia)

26. De Maddalena, C. High level of genetic heterogeneity in S and P genes of genotype D hepatitis B virus / C. De Maddalena, C. Giambelli, E. Tanzi, D. Colzani, M. Schiavini, L. Milazzo, F. Bernini, E. Ebranati, A. Cargnel, R. Bruno, M. Galli, G. Zehender // Virology. – 2007. – vol. 365. – P. 113-124.

27. Bissinger, A.L. Epidemiology and Genotyping of Patients with Chronic Hepatitis B: Genotype Shifting Observed in Patients from Central Europe / A.L. Bissinger, C. Fehrle, C.R. Werner, U.M. Lauer, N.P. Malek, C.P. Berg // Pol. J. Microbiol. – 2015. – vol. 64(1). – P. 15-21.

28. Khan, A. Novel point mutations and mutational complexes in the enhancer II, core promoter and precore regions of hepatitis B virus genotype D1 associated with hepatocellular carcinoma in Saudi Arabia / Khan A., Al Balwi M.A., Tanaka Y., Hajeer A., Sanai F.M., Al Abdulkarim I., Al Ayyar L., Badri M., Saudi D., Tamimi W., Mizokami M., Al Knawy B. // Int. J. Cancer. – 2013. – vol. 133 (12). – P. 2864-2871.

29. Banerjee, P. A Rare HBV Subgenotype D4 with Unique Genomic Signatures Identified in North-Eastern India – An Emerging Clinical Challenge? / Banerjee P., Mondal R. K., Nandi M., Ghosh S., Khatun M., Chakraborty N., Bhattacharya S., RoyChoudhury A., Banerjee S., Santra A., Sil S., Chowdhury A., Bhaumik P., Datta S. // PLoS One. – 2014. – vol. 9 (10). e109425.


Review

For citations:


Semenov A.V., Ostankova Yu.V., Gerasimova V.V., Bichurina M.A., Mukomolov S.L., Kozlov A.V., Totolian A.A. For the question about Molecular Epidemiology of Hepatitis B Virus Infection in the Republic Sakha (Yakutia). Journal Infectology. 2016;8(1):57-65. (In Russ.)

Views: 877


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 2072-6732 (Print)